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A Survey on Deep Learning Approaches Used in Genomics

    Authors

    • Rohit Kumar Gupta 1
    • Sweeti Sah 1
    • B Surendiran 1
    • Shankar Narayan 2
    • Arunkumar P 1

    1 Department of Computer Science and Engineering, National Institute of Technology Puducherry, Karaikal India.

    2 Sr. Analyst/Sr.Scientist, Forensic Science Laboratory, Govt of Puducherry, Puducherry- 607403.

,

Document Type : Review Article

10.47392/IRJASH.2023.072
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Abstract

Deep learning (DL) methods have shown remarkable success in address-   ing various problems across different domains. Classifying DNA sequences presents a formidable challenge in the field of bioinformatics. This review delves into various technologies centered around Alignment methods and Deep Learning for the purpose of classification. The aim is to achieve accurate  and scalable predictions for DNA sequence classification. DL methods have proven effective in overcoming the primary challenges faced during the train- ing process. The paper delves into previous classification methods like align- ment methods and highlights their limitations. Subsequently, we delve into the application of deep learning, specifically using CNN and RNN models, for DNA sequence classification. We evaluate their respective accuracies and dis- cuss the differences and drawbacks associated with these methods.

Keywords

  • Common stage in DNA sequencing
  • DNA sequencing method
  • Deep learning
  • Genomics
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International Research Journal on Advanced Science Hub
Volume 5, Issue 11
November 2023
Page 397-408
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History
  • Receive Date: 16 August 2023
  • Revise Date: 04 November 2023
  • Accept Date: 12 November 2023
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APA

Gupta, R. K. , Sah, S. , Surendiran, B. , Narayan, S. and P, A. (2023). A Survey on Deep Learning Approaches Used in Genomics. International Research Journal on Advanced Science Hub, 5(11), 397-408. doi: 10.47392/IRJASH.2023.072

MLA

Gupta, R. K. , , Sah, S. , , Surendiran, B. , , Narayan, S. , and P, A. . "A Survey on Deep Learning Approaches Used in Genomics", International Research Journal on Advanced Science Hub, 5, 11, 2023, 397-408. doi: 10.47392/IRJASH.2023.072

HARVARD

Gupta, R. K., Sah, S., Surendiran, B., Narayan, S., P, A. (2023). 'A Survey on Deep Learning Approaches Used in Genomics', International Research Journal on Advanced Science Hub, 5(11), pp. 397-408. doi: 10.47392/IRJASH.2023.072

CHICAGO

R. K. Gupta , S. Sah , B. Surendiran , S. Narayan and A. P, "A Survey on Deep Learning Approaches Used in Genomics," International Research Journal on Advanced Science Hub, 5 11 (2023): 397-408, doi: 10.47392/IRJASH.2023.072

VANCOUVER

Gupta, R. K., Sah, S., Surendiran, B., Narayan, S., P, A. A Survey on Deep Learning Approaches Used in Genomics. International Research Journal on Advanced Science Hub, 2023; 5(11): 397-408. doi: 10.47392/IRJASH.2023.072

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